Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003651annotation not available (172 aa)    
Predicted Functional Partners:
ENSVPAP00000008118
annotation not available
      
 0.744
STXBP6
Syntaxin binding protein 6.
      
 0.665
TRMT2B
tRNA methyltransferase 2 homolog B.
     
 0.656
GIMAP2
GTPase, IMAP family member 2.
      
 0.641
CABCOCO1
Ciliary associated calcium binding coiled-coil 1.
      
 0.634
AAGAB
Alpha and gamma adaptin binding protein.
      
 0.615
CCDC146
Coiled-coil domain containing 146.
      
 0.615
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.608
TERB1
Telomere repeat binding bouquet formation protein 1.
      
 0.608
TPP2
Tripeptidyl peptidase 2.
     
 0.590
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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