STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SWAP70Switching B cell complex subunit SWAP70. (576 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.704
RANBP2
RAN binding protein 2.
    
 0.655
TBC1D31
TBC1 domain family member 31.
    
  0.572
ENSVPAP00000010613
annotation not available
   
  0.557
ENSVPAP00000006432
annotation not available
    
 0.548
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.533
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.532
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.511
NUP107
Nucleoporin 107.
    
 0.510
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.505
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.