Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEK7NIMA related kinase 7. (302 aa)    
Predicted Functional Partners:
NEK9
NIMA related kinase 9.
    
 0.985
ENSVPAP00000009678
annotation not available
    
 
 0.966
RPS6KB1
Ribosomal protein S6 kinase B1.
    
   0.817
RCC1L
RCC1 like.
    
 0.734
ENSVPAP00000002634
annotation not available
    
 0.723
ENSVPAP00000005644
annotation not available
      
 0.675
RSPH1
Radial spoke head component 1.
      
 0.668
EML4
EMAP like 4.
    
 0.663
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.660
INVS
Inversin.
    
 
 0.660
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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