Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AICDAActivation induced cytidine deaminase. (147 aa)    
Predicted Functional Partners:
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.961
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.953
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.948
CBFB
Core-binding factor subunit beta.
    
 
 0.940
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
 0.926
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.916
CYC1
Cytochrome c1.
   
 0.915
UQCRB
Cytochrome b-c1 complex subunit 7.
   
 0.913
UNG
Uracil DNA glycosylase.
     
 0.913
COA6
Cytochrome c oxidase assembly factor 6.
   
 0.909
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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