Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003669annotation not available (198 aa)    
Predicted Functional Partners:
ENSVPAP00000005374
annotation not available
    
 0.961
HDAC2
Histone deacetylase 2.
    
 0.804
POU3F4
POU class 3 homeobox 4.
   
 0.788
ENSVPAP00000001520
annotation not available
    
 0.786
ENSVPAP00000003831
annotation not available
    
 
 0.782
POU2F1
POU class 2 homeobox 1.
   
 0.764
LIN28A
Lin-28 homolog A.
    
 0.742
PAX4
Paired box 4.
   
 0.724
PAX3
Paired box 3.
   
 0.723
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.709
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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