Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FTH1Ferritin heavy chain 1. (172 aa)    
Predicted Functional Partners:
ENSVPAP00000005119
annotation not available
   
 0.998
NCOA4
Nuclear receptor coactivator 4.
    
 0.994
FXN
Frataxin.
    
 0.962
CP
Ceruloplasmin.
     
 0.931
ENSVPAP00000008380
annotation not available
     
 0.924
TRPM6
Transient receptor potential cation channel subfamily M member 6.
      
 0.923
FECH
Ferrochelatase.
    
 0.920
HEPHL1
Hephaestin like 1.
     
 0.916
HEPH
Hephaestin.
     
 0.912
TFRC
Transferrin receptor.
   
 0.899
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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