Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003709annotation not available (240 aa)    
Predicted Functional Partners:
CEP76
Centrosomal protein 76.
      
 0.923
ENSVPAP00000002882
annotation not available
      
 0.923
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.920
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.888
COPZ2
Coatomer protein complex subunit zeta 2.
      
 0.864
UFM1
Ubiquitin fold modifier 1.
   
  
 0.808
TMED10
Transmembrane p24 trafficking protein 10.
   
 
 0.805
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.798
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.757
ENSVPAP00000003701
annotation not available
      
 0.724
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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