Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFF1AF4/FMR2 family member 1. (1197 aa)    
Predicted Functional Partners:
CCNT1
Cyclin T1.
   
 0.993
CDK9
Cyclin dependent kinase 9.
    
 0.992
ELL3
Elongation factor for RNA polymerase II 3.
    
 0.992
MLLT3
MLLT3 super elongation complex subunit.
    
 0.989
AFF4
AF4/FMR2 family member 4.
    
 
 0.977
ELL2
Elongation factor for RNA polymerase II 2.
    
 0.973
CCNT2
Cyclin T2.
   
 0.966
EAF2
ELL associated factor 2.
    
 0.894
ENSVPAP00000005197
annotation not available
   
 0.889
ENSVPAP00000005996
annotation not available
   
 
 0.855
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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