Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HSD17B13Hydroxysteroid 17-beta dehydrogenase 13. (300 aa)    
Predicted Functional Partners:
CD3E
CD3e molecule.
   
 0.865
CD3G
CD3g molecule.
   
 0.752
FDX1
Ferredoxin 1.
  
 0.690
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.663
RLBP1
Retinaldehyde binding protein 1.
    
 0.651
TAGAP
T cell activation RhoGTPase activating protein.
      
 0.631
TTPA
Alpha tocopherol transfer protein.
   
  0.609
TTPAL
Alpha tocopherol transfer protein like.
   
  0.609
METTL7A
Methyltransferase like 7A.
    
 
 0.589
CLVS1
Clavesin 1.
    
  0.569
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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