Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003735annotation not available (175 aa)    
Predicted Functional Partners:
RB1
RB transcriptional corepressor 1.
    
   0.965
ENSVPAP00000002608
annotation not available
   
 
 0.931
FBXO21
F-box protein 21.
    
 
 0.901
CREBBP
CREB binding protein.
    
 
 0.883
MDM2
MDM2 proto-oncogene.
    
 
 0.840
MAGEF1
MAGE family member F1.
    
 
 0.832
MAGEE2
MAGE family member E2.
    
 
 0.715
MAPRE2
Microtubule associated protein RP/EB family member 2.
      
 0.673
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
      
 0.664
TBX22
T-box transcription factor 22.
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.