Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003753annotation not available (552 aa)    
Predicted Functional Partners:
MLH1
mutL homolog 1.
    
 
 0.962
MTA3
Metastasis associated 1 family member 3.
   
 0.843
TDG
Thymine DNA glycosylase.
      
 0.810
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.803
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.742
ENSVPAP00000011053
annotation not available
   
 0.742
ENSVPAP00000005678
annotation not available
    
 0.728
POLB
DNA polymerase beta.
      
 0.728
DNMT3B
DNA methyltransferase 3 beta.
    
 
 0.718
SIN3A
SIN3 transcription regulator family member A.
    
 0.709
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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