Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003764annotation not available (406 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.944
CAST
Calpastatin.
   
 0.941
YPEL5
Yippee like 5.
      
 0.721
YIPF6
Yip1 domain family member 6.
      
 0.692
LCLAT1
Lysocardiolipin acyltransferase 1.
      
 0.690
ZSCAN12
Zinc finger and SCAN domain containing 12.
    
 
 0.682
NEB
Nebulin.
   
  
 0.652
SKP2
S-phase kinase associated protein 2.
      
 0.607
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.606
ENSVPAP00000000827
annotation not available
      
 0.604
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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