Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAT4FAT atypical cadherin 4. (4290 aa)    
Predicted Functional Partners:
ENSVPAP00000010021
annotation not available
    
 0.914
ENSVPAP00000005744
annotation not available
   
 
 0.902
GDNF
Glial cell derived neurotrophic factor.
      
 0.837
CTNNB1
Catenin beta 1.
    
 0.825
PCDH15
Protocadherin related 15.
   
 0.802
RHOV
Ras homolog family member V.
    
 0.779
CTNND1
Catenin delta 1.
    
 0.752
PKP4
Plakophilin 4.
    
 0.752
CTNND2
Catenin delta 2.
    
 0.752
APOB
Apolipoprotein B.
      
 0.718
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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