Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003776annotation not available (43 aa)    
Predicted Functional Partners:
DEFB124
Defensin beta 124.
     
 0.845
ENSVPAP00000011276
annotation not available
     
 0.824
ENSVPAP00000000409
annotation not available
   
 
 0.809
ENSVPAP00000000410
annotation not available
   
 
 0.776
ENSVPAP00000001849
annotation not available
     
 0.735
DEFB129
Defensin beta 129.
     
 0.727
DEFB110
Defensin beta 110.
   
 
 0.727
DEFB127
Defensin beta 127.
     
 0.705
ENSVPAP00000000419
annotation not available
     
 0.705
DEFB116
Defensin beta 116.
     
 0.695
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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