STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEFB121Defensin beta 121. (75 aa)    
Predicted Functional Partners:
DEFB113
Defensin beta 113.
     
 0.836
DEFB129
Defensin beta 129.
     
 0.764
DEFB110
Defensin beta 110.
   
 
 0.709
ENSVPAP00000003778
annotation not available
  
  
 0.687
ENSVPAP00000011276
annotation not available
     
 0.670
DEFB124
Defensin beta 124.
     
 0.651
ENSVPAP00000006913
annotation not available
     
 0.594
DEFB123
Defensin beta 123.
     
 0.580
DEFB128
Defensin beta 128.
  
 
 0.514
ENSVPAP00000010250
annotation not available
      
 0.509
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.