Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003790annotation not available (124 aa)    
Predicted Functional Partners:
ENSVPAP00000008328
annotation not available
   
 0.997
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.981
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.928
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.904
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
   
 
 0.883
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.875
CNIH4
Cornichon family AMPA receptor auxiliary protein 4.
     
 0.838
STX5
Syntaxin 5.
    
 0.834
ENSVPAP00000007465
annotation not available
     
 0.830
SEC24D
SEC24 homolog D, COPII coat complex component.
     
 0.830
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.