Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003822annotation not available (44 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
    0.973
ACTB
Actin beta.
   
 0.941
RPL37A
Ribosomal protein L37a.
   
  
 0.914
ENSVPAP00000000725
annotation not available
   
  
 0.810
RPS29
Ribosomal protein S29.
   
  
 0.810
ENSVPAP00000008772
annotation not available
   
  
 0.805
RPS27A
Ribosomal protein S27a.
   
    0.797
RPL35A
Ribosomal protein L35a.
   
    0.792
RPL13A
Ribosomal protein L13a.
   
    0.775
ENSVPAP00000007885
annotation not available
   
    0.770
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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