Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXL3F-box and leucine rich repeat protein 3. (429 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
    
 0.999
CUL1
Cullin 1.
   
 0.998
SKP1
S-phase kinase associated protein 1.
    
 0.998
CRY2
Cryptochrome circadian regulator 2.
    
 0.993
RBX1
Ring-box 1.
    
 0.992
ENSVPAP00000006811
annotation not available
  
  
 
0.901
CUL3
Cullin 3.
   
 0.885
RFX3
Regulatory factor X3.
    
   0.825
ENSVPAP00000005500
annotation not available
      
 0.677
RNF7
Ring finger protein 7.
    
 0.676
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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