Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003831annotation not available (879 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
    
 
 0.920
SATB2
SATB homeobox 2.
    
 
 0.906
ENSVPAP00000003669
annotation not available
    
 
 0.782
SOX2
SRY-box transcription factor 2.
    
 
 0.782
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.781
RELN
Reelin.
      
 0.741
SATB1
SATB homeobox 1.
    
 
 0.706
ZNF451
Zinc finger protein 451.
    
 
 0.699
ENSVPAP00000004474
annotation not available
    
 
 0.698
FOXP2
Forkhead box P2.
    
 
 0.689
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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