Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMIM8Small integral membrane protein 8. (97 aa)    
Predicted Functional Partners:
ENSVPAP00000007476
annotation not available
    
   0.829
SLC25A2
Solute carrier family 25 member 2.
      
 0.717
ENSVPAP00000001241
annotation not available
      
 0.691
ENSVPAP00000003696
annotation not available
      
 0.690
CBY2
Chibby family member 2.
      
 0.643
MON2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
      
 0.633
RAI14
Retinoic acid induced 14.
      
 0.607
PIWIL2
Piwi like RNA-mediated gene silencing 2.
      
 0.603
RIOK2
RIO kinase 2.
      
 0.596
ENSVPAP00000004341
annotation not available
      
 0.593
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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