Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003864annotation not available (621 aa)    
Predicted Functional Partners:
BBOF1
Basal body orientation factor 1.
    
 
 0.931
R3HCC1L
R3H domain and coiled-coil containing 1 like.
      
 0.876
SPEF2
Sperm flagellar 2.
    
 
 0.688
VPS52
VPS52 subunit of GARP complex.
      
 0.680
INTS8
Integrator complex subunit 8.
    
 
 0.676
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.672
ENSVPAP00000011106
annotation not available
   
 
 0.654
CCDC38
Coiled-coil domain containing 38.
    
 
 0.652
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.641
ENSVPAP00000000456
annotation not available
   
 
 0.626
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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