Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003904annotation not available (652 aa)    
Predicted Functional Partners:
C9orf24
Chromosome 9 open reading frame 24.
     
 0.734
PLLP
Plasmolipin.
      
 0.686
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.683
RMC1
Regulator of MON1-CCZ1.
      
 0.665
SLC1A1
Solute carrier family 1 member 1.
  
  
 0.625
THAP1
THAP domain containing 1.
      
 0.609
ENSVPAP00000002189
annotation not available
     
 0.600
PTH
Parathyroid hormone.
      
 0.581
SLC35F2
Solute carrier family 35 member F2.
     
 0.577
SLC20A1
Solute carrier family 20 member 1.
   
 
 0.547
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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