Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C8orf34Chromosome 8 open reading frame 34. (536 aa)    
Predicted Functional Partners:
IMPAD1
Inositol monophosphatase domain containing 1.
      
 0.510
ENSVPAP00000001071
annotation not available
      
 0.481
GFPT1
Glutamine--fructose-6-phosphate transaminase 1.
      
 0.432
ENSVPAP00000007689
annotation not available
      
 0.416
LIMCH1
LIM and calponin homology domains 1.
      
 0.410
DNAJC5B
DnaJ heat shock protein family (Hsp40) member C5 beta.
      
 0.410
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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