Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003929annotation not available (351 aa)    
Predicted Functional Partners:
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.970
ENSVPAP00000007686
annotation not available
 
      0.877
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.814
CD163
CD163 molecule.
    
 0.784
ENSVPAP00000002482
annotation not available
    
 0.727
ENSVPAP00000008318
annotation not available
   
 0.667
GRB2
Growth factor receptor bound protein 2.
    
 0.655
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
    
 0.646
CCNE1
Cyclin E1.
      
 0.615
LRP12
LDL receptor related protein 12.
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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