Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMP5Bone morphogenetic protein 5. (454 aa)    
Predicted Functional Partners:
BMP2
Bone morphogenetic protein 2.
   
 0.923
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.920
BMPR1A
Bone morphogenetic protein receptor type 1A.
    
 0.911
BMPR1B
Bone morphogenetic protein receptor type 1B.
    
 0.903
ACVR1
Activin A receptor type 1.
    
 0.899
ACVR2A
Activin A receptor type 2A.
    
 0.881
SMAD4
SMAD family member 4.
    
 0.723
BMPER
BMP binding endothelial regulator.
    
 0.694
ACVRL1
Activin A receptor like type 1.
    
 0.687
FST
Follistatin.
    
 0.678
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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