Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RXYLT1Ribitol xylosyltransferase 1. (386 aa)    
Predicted Functional Partners:
FKTN
Fukutin.
   
 0.999
B4GAT1
Beta-1,4-glucuronyltransferase 1.
     
 0.990
FAM3C
Family with sequence similarity 3 member C.
    
 0.930
ENSVPAP00000010281
annotation not available
      
 0.923
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
   
  
 0.901
CRPPA
CDP-L-ribitol pyrophosphorylase A.
  
   
 0.881
ENSVPAP00000002882
annotation not available
      
 0.847
POMT2
Protein O-mannosyltransferase 2.
   
  
 0.749
CERKL
Ceramide kinase like.
      
 0.739
ENSVPAP00000005319
annotation not available
   
  
 0.723
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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