Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SH3D19SH3 domain containing 19. (785 aa)    
Predicted Functional Partners:
SH3YL1
SH3 and SYLF domain containing 1.
    
   0.965
CLINT1
Clathrin interactor 1.
     
 0.853
VTA1
Vesicle trafficking 1.
    
   0.831
GCH1
GTP cyclohydrolase 1.
    
   0.831
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
   0.820
PUM1
Pumilio RNA binding family member 1.
     
  0.752
CA10
Carbonic anhydrase 10.
    
 
 0.703
CTNNA2
Catenin alpha 2.
    
 0.691
CTNNA1
Catenin alpha 1.
    
 0.691
CTNNAL1
Catenin alpha like 1.
    
 0.691
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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