Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003957annotation not available (389 aa)    
Predicted Functional Partners:
ENSVPAP00000003380
annotation not available
    
   0.793
DPYSL3
Dihydropyrimidinase like 3.
    
   0.733
TTLL5
Tubulin tyrosine ligase like 5.
      
 0.615
BTBD8
BTB domain containing 8.
      
 0.608
CEP41
Centrosomal protein 41.
      
 0.608
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.587
RFX4
Regulatory factor X4.
      
 0.586
RFX3
Regulatory factor X3.
      
 0.582
ENSVPAP00000002402
annotation not available
      
 0.563
PLEKHM3
Pleckstrin homology domain containing M3.
      
 0.537
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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