Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003984annotation not available (947 aa)    
Predicted Functional Partners:
ENSVPAP00000000769
annotation not available
    
 
 0.806
CFAP58
Cilia and flagella associated protein 58.
   
 0.757
ENSVPAP00000006767
annotation not available
   
 0.726
TTC29
Tetratricopeptide repeat domain 29.
   
 
 0.708
ENSVPAP00000008078
annotation not available
    
 0.680
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.671
DYNLRB2
Dynein light chain roadblock-type 2.
   
 0.638
ENSVPAP00000003396
annotation not available
    
 
 0.635
DNAI2
Dynein axonemal intermediate chain 2.
   
 0.629
DYNLL2
Dynein light chain LC8-type 2.
    
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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