STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003985annotation not available (100 aa)    
Predicted Functional Partners:
H2BC5
Histone H2B type 1-M.
  
 0.938
H2BU1
H2B.U histone 1.
  
 0.934
H2AC6
Histone H2A type 1-C.
    
  0.927
H2BC15
Histone H2B type 1-N.
  
 0.911
H2BC18
H2B clustered histone 18.
  
 0.906
H2AW
Histone H2A type 3.
    
  0.883
ENSVPAP00000008975
annotation not available
    
  0.883
ENSVPAP00000002004
annotation not available
  
 0.860
LOC102532520
Histone H2B type 2-E.
  
 0.859
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.843
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.