Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BUD31BUD31 homolog. (143 aa)    
Predicted Functional Partners:
SNW1
SNW domain containing 1.
   
 0.998
RBM22
RNA binding motif protein 22.
   
 0.998
PPIE
Peptidylprolyl isomerase E.
   
  0.998
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.998
ENSVPAP00000011765
annotation not available
   
 0.998
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.983
CDC40
Cell division cycle 40.
    
 0.983
CTNNBL1
Catenin beta like 1.
    
 
 0.983
SYF2
SYF2 pre-mRNA splicing factor.
   
 
 0.982
PRPF19
pre-mRNA processing factor 19.
    
 
 0.976
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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