Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTFR1LMitochondrial fission regulator 1 like. (296 aa)    
Predicted Functional Partners:
ARMC1
Armadillo repeat containing 1.
    
 
 0.903
CSTF1
Cleavage stimulation factor subunit 1.
      
 0.692
ENSVPAP00000010372
annotation not available
      
 0.684
MRRF
Mitochondrial ribosome recycling factor.
      
 0.666
COQ6
Coenzyme Q6, monooxygenase.
      
 0.647
ENSVPAP00000000121
annotation not available
   
  
 0.645
ENSVPAP00000010664
annotation not available
      
 0.634
ENSVPAP00000011725
annotation not available
      
 0.615
LRRC49
Leucine rich repeat containing 49.
      
 0.609
VPS39
VPS39 subunit of HOPS complex.
      
 0.597
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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