Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCLMGlutamate-cysteine ligase modifier subunit. (232 aa)    
Predicted Functional Partners:
GSS
Glutathione synthetase.
   
 0.920
BCAT1
Branched chain amino acid transaminase 1.
  
 0.916
ENSVPAP00000007861
annotation not available
    
 0.907
AGXT2
Alanine--glyoxylate aminotransferase 2.
  
  0.905
ENSVPAP00000003109
annotation not available
     
 0.904
KYAT3
Kynurenine aminotransferase 3.
  
 
 0.873
CTH
Cystathionine gamma-lyase.
    
 0.839
CDO1
Cysteine dioxygenase type 1.
   
 
 0.837
GOT1
Glutamic-oxaloacetic transaminase 1.
  
 0.829
GOT2
Glutamic-oxaloacetic transaminase 2.
  
 0.829
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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