Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004024annotation not available (881 aa)    
Predicted Functional Partners:
VRK2
VRK serine/threonine kinase 2.
   
 0.991
ENSVPAP00000004065
annotation not available
   
 0.959
ENSVPAP00000008347
annotation not available
   
 0.959
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
  0.939
ENSVPAP00000006502
annotation not available
    
  0.939
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.936
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
 0.936
BANF1
Barrier to autointegration factor 1.
    
 0.903
RHOG
Ras homolog family member G.
    
  0.861
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
    
   0.857
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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