Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA7BGolgin A7 family member B. (85 aa)    
Predicted Functional Partners:
ZDHHC9
Zinc finger DHHC-type containing 9.
    
 0.996
ZDHHC5
Zinc finger DHHC-type containing 5.
    
 0.994
CLDND1
Claudin domain containing 1.
   
   0.925
ZDHHC19
Zinc finger DHHC-type containing 19.
    
 0.922
ENSVPAP00000002246
annotation not available
    
 0.867
ENSVPAP00000007518
annotation not available
    
 0.867
RAB4A
RAB4A, member RAS oncogene family.
    
  0.859
ENSVPAP00000004464
annotation not available
    
 0.847
ENSVPAP00000004036
annotation not available
    
 0.841
SPRY3
Sprouty RTK signaling antagonist 3.
    
   0.770
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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