Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004046annotation not available (490 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
  
 0.907
ERCC6L2
ERCC excision repair 6 like 2.
 
      0.899
FANCM
FA complementation group M.
  
 0.891
ACTL6A
Actin like 6A.
    
 0.791
RAD18
RAD18 E3 ubiquitin protein ligase.
   
 0.760
ENSVPAP00000005957
annotation not available
    
 0.749
PLK2
Polo like kinase 2.
   
 0.749
INO80C
INO80 complex subunit C.
    
 0.734
EXO1
Exonuclease 1.
  
 0.706
ACTR8
Actin related protein 8.
    
  0.696
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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