Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004049annotation not available (192 aa)    
Predicted Functional Partners:
CCDC175
Coiled-coil domain containing 175.
      
 0.831
CLVS2
Clavesin 2.
   
  
 0.777
ENSVPAP00000006998
annotation not available
      
 0.760
UTS2B
Urotensin 2B.
      
 0.703
ENSVPAP00000011584
annotation not available
      
 0.688
SNX3
Sorting nexin 3.
      
 0.687
ENSVPAP00000009701
annotation not available
   
  
 0.682
ENSVPAP00000003542
annotation not available
      
 0.658
ARHGAP36
Rho GTPase activating protein 36.
      
 0.658
TMEM88
Transmembrane protein 88.
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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