Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD2LMBR1 domain containing 2. (695 aa)    
Predicted Functional Partners:
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.826
PITHD1
PITH domain containing 1.
      
 0.769
CAPSL
Calcyphosine like.
 
    
 0.750
UBAC1
UBA domain containing 1.
      
 0.688
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
  
 0.679
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.678
DNAJC22
DnaJ heat shock protein family (Hsp40) member C22.
      
 0.665
MEX3C
Mex-3 RNA binding family member C.
   
  
 0.653
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
    0.648
FAM214A
Family with sequence similarity 214 member A.
      
 0.642
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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