Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004069annotation not available (1079 aa)    
Predicted Functional Partners:
INTU
Inturned planar cell polarity protein.
    
 
 0.948
WDPCP
WD repeat containing planar cell polarity effector.
    
 
 0.946
ENSVPAP00000004068
annotation not available
 
     0.935
RPGRIP1L
RPGRIP1 like.
    
 
 0.678
WDR70
WD repeat domain 70.
      
 0.644
NUP155
Nucleoporin 155.
      
 0.615
TBC1D32
TBC1 domain family member 32.
      
 0.609
CDC20B
Cell division cycle 20B.
    
 
 0.587
NIPBL
NIPBL cohesin loading factor.
      
 0.512
TMEM216
Transmembrane protein 216.
      
 0.461
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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