Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR70WD repeat domain 70. (591 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.993
CDC40
Cell division cycle 40.
   
  0.990
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.989
ENSVPAP00000011570
annotation not available
    
  0.988
CWC25
CWC25 spliceosome associated protein homolog.
    
  0.987
DHX35
DEAH-box helicase 35.
   
 0.968
ENSVPAP00000002538
annotation not available
    
  0.966
BUD31
BUD31 homolog.
   
 
 0.966
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.966
PPIL4
Peptidylprolyl isomerase like 4.
    
  0.956
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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