Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1LLimb development membrane protein 1 like. (389 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
    
 
 0.721
LUM
Lumican.
    
 
 0.551
ACVRL1
Activin A receptor like type 1.
    
 
 0.539
FKBP10
FKBP prolyl isomerase 10.
    
 
 0.539
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
      
 0.537
ENSVPAP00000007127
annotation not available
      
 0.522
SKP2
S-phase kinase associated protein 2.
      
 0.513
DHH
Desert hedgehog signaling molecule.
 
    
 0.512
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.511
MRPS28
Mitochondrial ribosomal protein S28.
     
  0.493
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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