Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SZRD1SUZ RNA binding domain containing 1. (152 aa)    
Predicted Functional Partners:
STRAP
Serine/threonine kinase receptor associated protein.
    
   0.964
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.771
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
    0.768
UTP15
UTP15 small subunit processome component.
   
    0.767
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 
 0.739
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.739
SNU13
Small nuclear ribonucleoprotein 13.
   
    0.678
NSA2
NSA2 ribosome biogenesis factor.
      
 0.677
SMC1B
Structural maintenance of chromosomes 1B.
   
    0.674
S100A16
S100 calcium binding protein A16.
    
 
 0.638
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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