Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004112annotation not available (1149 aa)    
Predicted Functional Partners:
ENSVPAP00000003151
annotation not available
   
 0.995
CD2AP
CD2 associated protein.
    
 0.990
ENSVPAP00000006808
annotation not available
   
 0.949
WT1
WT1 transcription factor.
    
 
 0.943
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 0.919
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.906
NCK1
NCK adaptor protein 1.
    
 0.862
PLCE1
Phospholipase C epsilon 1.
      
 0.741
ENSVPAP00000002306
annotation not available
    
 0.737
FYN
FYN proto-oncogene, Src family tyrosine kinase.
    
 0.737
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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