Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004125annotation not available (327 aa)    
Predicted Functional Partners:
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.913
ENSVPAP00000004976
annotation not available
   
 0.881
SELENOF
Selenoprotein F.
      
 0.837
MOCOS
Molybdenum cofactor sulfurase.
    
 0.832
ENSVPAP00000005861
annotation not available
    
   0.832
SELENOS
Selenoprotein S.
      
 0.821
SELENOT
Selenoprotein T.
   
  
 0.813
ENSVPAP00000003541
annotation not available
   
 0.792
GART
annotation not available
  
   0.789
ENSVPAP00000011483
annotation not available
  
  
 0.686
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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