Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUL2Cullin 2. (730 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 0.997
ELOC
Elongin C.
   
 0.996
RBX1
Ring-box 1.
    
 0.994
ENSVPAP00000003006
annotation not available
    
 0.993
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.983
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.980
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.974
RNF7
Ring finger protein 7.
    
 0.953
COPS2
COP9 signalosome subunit 2.
   
  0.952
COMMD1
Copper metabolism domain containing 1.
    
 0.950
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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