STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USPL1Ubiquitin specific peptidase like 1. (1079 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.738
INTS14
Integrator complex subunit 14.
    
 0.737
DESI1
Desumoylating isopeptidase 1.
      
 0.735
ICE2
Interactor of little elongation complex ELL subunit 2.
   
 
 0.725
USP33
Ubiquitin specific peptidase 33.
    
 
 0.722
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.709
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.704
ENSVPAP00000004762
annotation not available
    
 0.703
SUMO1
Small ubiquitin like modifier 1.
    
 0.701
INTS9
Integrator complex subunit 9.
    
 0.700
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.