Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNRF1Zinc and ring finger 1. (228 aa)    
Predicted Functional Partners:
ENSVPAP00000002735
annotation not available
    
 
 0.967
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 
 0.856
ARRDC5
Arrestin domain containing 5.
      
 0.714
AQR
Aquarius intron-binding spliceosomal factor.
      
 0.691
MS4A1
Membrane spanning 4-domains A1.
      
 0.668
JAK1
Janus kinase 1.
   
  
 0.652
ENSVPAP00000004446
annotation not available
     
 0.650
MEMO1
Mediator of cell motility 1.
      
 0.643
CLEC3A
C-type lectin domain family 3 member A.
      
 0.636
ENSVPAP00000001226
annotation not available
     
 0.629
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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