Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004192annotation not available (129 aa)    
Predicted Functional Partners:
CFL2
Cofilin 2.
  
 
0.999
ENSVPAP00000007731
annotation not available
   
 0.997
SSH2
Slingshot protein phosphatase 2.
    
 0.986
ENSVPAP00000010877
annotation not available
    
 
 0.986
CAP1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 0.985
CAP2
Cyclase associated actin cytoskeleton regulatory protein 2.
   
 0.982
ACTB
Actin beta.
   
 0.960
DSTN
Destrin, actin depolymerizing factor.
   
   0.956
ENSVPAP00000006432
annotation not available
   
 
 0.954
PFN4
Profilin family member 4.
   
 0.930
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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