Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004197annotation not available (312 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.990
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.989
ENSVPAP00000001093
annotation not available
    
 0.985
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.982
SF3B2
Splicing factor 3b subunit 2.
    
 
 0.982
CDC40
Cell division cycle 40.
    
 0.978
IK
IK cytokine.
    
  0.970
ENSVPAP00000011570
annotation not available
    
 0.956
ILF3
Interleukin enhancer binding factor 3.
    
   0.948
CDC5L
Cell division cycle 5 like.
    
 
 0.941
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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