LRIT2 protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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co-expression

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[Homology]

Score

LRIT2

Leucine rich repeat, Ig-like and transmembrane domains 2. (552 aa)

Predicted Functional Partners:

LRIT1

0.830

CCDC126

0.763

FAM169A

0.719

MANSC4

0.682

ANKRD33

0.658

ENSVPAP00000008585

0.633

ENSVPAP00000001618

0.615

ENSVPAP00000005247

0.615

ENSVPAP00000010688

0.615

ENSVPAP00000008127

0.585

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD33	CCDC126	ENSVPAP00000007170	ENSVPAP00000001686	Ankyrin repeat domain 33.	Coiled-coil domain containing 126.	0.605
ANKRD33	LRIT1	ENSVPAP00000007170	ENSVPAP00000001796	Ankyrin repeat domain 33.	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.621
ANKRD33	LRIT2	ENSVPAP00000007170	ENSVPAP00000004198	Ankyrin repeat domain 33.	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.658
CCDC126	ANKRD33	ENSVPAP00000001686	ENSVPAP00000007170	Coiled-coil domain containing 126.	Ankyrin repeat domain 33.	0.605
CCDC126	FAM169A	ENSVPAP00000001686	ENSVPAP00000006852	Coiled-coil domain containing 126.	Family with sequence similarity 169 member A.	0.658
CCDC126	LRIT1	ENSVPAP00000001686	ENSVPAP00000001796	Coiled-coil domain containing 126.	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.589
CCDC126	LRIT2	ENSVPAP00000001686	ENSVPAP00000004198	Coiled-coil domain containing 126.	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.763
ENSVPAP00000001618	ENSVPAP00000008585	ENSVPAP00000001618	ENSVPAP00000008585	annotation not available	annotation not available	0.508
ENSVPAP00000001618	ENSVPAP00000010688	ENSVPAP00000001618	ENSVPAP00000010688	annotation not available	annotation not available	0.891
ENSVPAP00000001618	LRIT2	ENSVPAP00000001618	ENSVPAP00000004198	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.615
ENSVPAP00000005247	LRIT1	ENSVPAP00000005247	ENSVPAP00000001796	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.615
ENSVPAP00000005247	LRIT2	ENSVPAP00000005247	ENSVPAP00000004198	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.615
ENSVPAP00000005247	MANSC4	ENSVPAP00000005247	ENSVPAP00000006049	annotation not available	MANSC domain containing 4.	0.667
ENSVPAP00000008127	LRIT2	ENSVPAP00000008127	ENSVPAP00000004198	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.585
ENSVPAP00000008585	ENSVPAP00000001618	ENSVPAP00000008585	ENSVPAP00000001618	annotation not available	annotation not available	0.508
ENSVPAP00000008585	ENSVPAP00000010688	ENSVPAP00000008585	ENSVPAP00000010688	annotation not available	annotation not available	0.508
ENSVPAP00000008585	LRIT2	ENSVPAP00000008585	ENSVPAP00000004198	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.633
ENSVPAP00000010688	ENSVPAP00000001618	ENSVPAP00000010688	ENSVPAP00000001618	annotation not available	annotation not available	0.891
ENSVPAP00000010688	ENSVPAP00000008585	ENSVPAP00000010688	ENSVPAP00000008585	annotation not available	annotation not available	0.508
ENSVPAP00000010688	LRIT2	ENSVPAP00000010688	ENSVPAP00000004198	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 2.	0.615